Haplotype-Specific DNA Methylation
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SNP
Gene
GWAS Disease/Phenotype
Genomic Coordinates
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SLC2A4RG
hits 4
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1
rs2297441
chr20:62327581-62327582
genes 6
GWAS disease/phenotype 1
rs2297441
LD Block:
chr20:61994263-62399641
Genes:
RTEL1
SLC2A4RG
STMN3
TNFRSF6B
ZBTB46
ZGPAT
GWAS Disease/Phenotype:
Ulcerative colitis
2
rs6062504
chr20:62348906-62348907
genes 4
GWAS disease/phenotype 1
rs6062504
LD Block:
chr20:61994263-62399641
Genes:
LIME1
SLC2A4RG
TNFRSF6B
ZGPAT
GWAS Disease/Phenotype:
Inflammatory bowel disease
3
rs4809330
chr20:62349585-62349586
genes 3
GWAS disease/phenotype 1
rs4809330
LD Block:
chr20:61994263-62399641
Genes:
RTEL1
SLC2A4RG
TNFRS-F6B
GWAS Disease/Phenotype:
Crohns disease
4
rs6062509
chr20:62362562-62362563
genes 32
GWAS disease/phenotype 1
rs6062509
LD Block:
chr20:61994263-62399641
Genes:
ABHD16B
ARFRP1
C20orf195
DNAJC5
EEF1A2
GMEB2
LIME1
LOC100505815
MIR1914
MIR647
MIR941-1
MIR941-2
MIR941-3
MIR941-4
PPDPF
PRIC285
PRPF6
PTK6
RTEL1
RTEL1-TN
RTEL1-TNFRSF6B
SAMD10
SLC2A4RG
SRMS
STMN3
TNFRSF6B
TPD52L2
UCKL1
UCKL1-AS1
ZBTB46
ZGPAT
ZNF512B
GWAS Disease/Phenotype:
Prostate cancer
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