Haplotype-Specific DNA Methylation
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Gene
GWAS Disease/Phenotype
Genomic Coordinates
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IKZF3
hits 4
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1
rs12946510
chr17:37912376-37912377
genes 5
GWAS disease/phenotype 1
rs12946510
LD Block:
chr17:37347328-38253228
Genes:
GSDMA
GSDMB
IKZF3
ORMDL3
ZPBP2
GWAS Disease/Phenotype:
Inflammatory bowel disease
2
rs9303277
chr17:37976468-37976469
genes 4
GWAS disease/phenotype 1
rs9303277
LD Block:
chr17:37347328-38253228
Genes:
GSDMB
IKZF3
ORMDL3
ZPBP2
GWAS Disease/Phenotype:
Primary biliary cirrhosis
3
rs2872507
chr17:38040762-38040763
genes 6
GWAS disease/phenotype 2
rs2872507
LD Block:
chr17:37347328-38253228
Genes:
GSDML
GSMDL
IKZF3
ORMDL3
PNMT
ZPBP2
GWAS Disease/Phenotype:
Crohns disease
Ulcerative colitis
4
rs9303280
chr17:38074030-38074031
genes 2
GWAS disease/phenotype 1
rs9303280
LD Block:
chr17:37347328-38253228
Genes:
GSDMB
IKZF3
GWAS Disease/Phenotype:
Self-reported allergy
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