Haplotype-Specific DNA Methylation
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SNP
Gene
GWAS Disease/Phenotype
Genomic Coordinates
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CTLA4
hits 4
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1
rs231735
chr2:204693875-204693876
genes 1
GWAS disease/phenotype 1
rs231735
LD Block:
chr2:204688431-204814676
Genes:
CTLA4
GWAS Disease/Phenotype:
Rheumatoid arthritis
2
rs1024161
chr2:204721751-204721752
genes 3
GWAS disease/phenotype 2
rs1024161
LD Block:
chr2:204688431-204814676
Genes:
CD28
CTLA4
ICOS
GWAS Disease/Phenotype:
Alopecia areata
Graves disease
3
rs3087243
chr2:204738918-204738919
genes 1
GWAS disease/phenotype 3
rs3087243
LD Block:
chr2:204688431-204814676
Genes:
CTLA4
GWAS Disease/Phenotype:
Rheumatoid arthritis
Type 1 diabetes
Type 1 diabetes autoantibodies
4
rs4675374
chr2:204802577-204802578
genes 3
GWAS disease/phenotype 1
rs4675374
LD Block:
chr2:204688431-204814676
Genes:
CD28
CTLA4
ICOS
GWAS Disease/Phenotype:
Celiac disease
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